Population:	CEU HCB JPT YRI Custom Haplotypes
Mother's haplotype
Father's haplotype:
Chromosome:	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X
Individual:	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
Haplotype length
Coverage:	-   -   -   -   -   -   -  3 4 5 6 7 8 9 10
Error Probability
Minimal Hamming distance
Maximal Hamming distance
Minimal fragment length
Maximal fragment length
Insert gaps in the fragment matrix? Yes No
Average gaps for fragment

min_len =
max_len =
err_prob =
coverage =
length =
gapped =
tot_gaps =
population =
chromosome =
individual =
h1 =
h2 =
minH =
maxH =

Father's Haplotype
Mother's Haplotype

Download matrix

Download matrix

Run?	Algorithm name	Status
	SpeedHap Use entropic filter
	Fast Hare
	MLF Iterations 15 30 50 80 100
	2 distances MEC
	SHR Iterations 5 10 15 20 30
	Your Algorithm Mother Father

Error rate penalty

Reconstruction Rate

You have to run reconstruction algorithms before.

Reconstruction Time

You have to run reconstruction algorithms before.